VPRT_SMRVH/172-273  ISQQRPTLKLKLNGK............LFSGILDTGADATVISYTHWPRNWPL..TTVATHLRGIGQAT.NPQQSAQMLKWE.....DSEGNNGHI.......TPYVLPN.LPVN......LWGRDILSQMKLVMC
O41289/167-268      ITNQKPSLTLWLDGK............AFTGLIDTGADVTIIKQEDWPSHWPT..TETLTHLRGIGQSS.NPKQSSKYLTWT.....DKENNSGLI.......KPFVIPY.LPVN......LWGRDLLAQMKIIMC
VPRT_JSRV/178-279   VTEARPELELRINAN............FFRGVLDTGADISVISDKYWPTTWPK..QMAISTLQGIGQTT.NPEQSSSLLTWK.....DKDGHTGQF.......KPYILPY.LPVN......LWGRDILSKMGVYLY
GAG_IPMA/674-774    SLNDRPKLRLKINGK............EFEGILDTGADKSIISTHWWPKAWPT..TESSHSLQGLGYQS.CPTISSVALTWE.....SSEGQQGKF.......IPYVLP..LPVN......LWGRDIMQHLGLILS
O56220/750-850      ISDSRPMLHIYLNGR............RFLGLLDTGADKTCIAGRDWPANWPI..HQTESSLQGLGMAC.GVARSSQ.PLRW.....QHEDKSGII.......HPFVIPT.LPFT......LWGRDIMKDIKVRLM
P87892/183-283      VSENRPVCKAIIQGK............QFEGLVDTGADVSIIALNQWPKNWPK..QKAVTGLVGIGTAS.EVYQSTEILHCL.....GPDNQESTV.......QPMITS..IPLN......LWGRDLLQQWGAEIT
Q83012/36-145       GLSNRPSIEVTWINPFVETGP...RQVTLKMMLDTGADVTVINEPSWPCTWPAIPTVGVEGVGGLTNAS.RSEFLLQGRIRR.....EKEEIRV.........SPYIAA..IGFN......ILGREALAQLHCVVS
Q9YLP8/10-104       TLWQQPHATIKXGGL............XKEALLDTGADDTVLEEMNLPGG......WTPTMIGGIGGFI.KVRQYDQIPIEI.....CGHTAIG.........TVLVGP..PPAN......IIGRNLWTXIGCPLN
O09807/4-98         TLWQRPVVIIKIEGQ............LKEALLDTGADDTVLEEMNLPGR......WKPKMIGGIGGFI.KVKQYDQILVEI.....CGHKAIG.........TVLVGP..TPVN......IIGRNLLTQIGCTLN
O71323/4-98         TLWQRPIVTIKIGGQ............LKEALLDTGADDTVLEEMTLPGK......WKPKMIVGIGGFT.XVRQYDQVPIEI.....CGYKVMX.........SVLIGP..TPXN......IIGRNLLTQIGCTLN
O92069/10-104       TLWQRPHATXXVGGX............QKEAXLDTGADDTVLEEMKLPGK......RKPKMIGGIGGFI.KVRQYDXRLPEI.....CGXKAIG.........TVLXGP..TPVN......IIGRNMLTQFGXPLN
O92067/10-104       TLWQRPLVSRXVRGQ............KXEALLDTGADDTVLEEMRLPGS......WKPKMIGGIGGFI.KVRQYEQSXLEI.....CGNRAIG.........TVLGGP..TPVN......IIGGNMLTQLGCPLN
POL_SIVCZ/84-178    TLWQRPLIPVKVEGQ............LCEALLDTGADDTVIERIQLQGL......WKPKMIGGIGGFI.KVKQFDNVHIEI.....EGRKVVG.........TVLVGP..TPVN......IIGRNILTQLGCTLV
O91080/502-596      TLWQRPVITVKIGKE............VREALLDTGADDTVIEELQLEGK......WKPKMIGGIGGFI.KVRQYDNITVDI.....QGRKAVG.........TVLVGP..TPVN......IIGRNLLTQIGCTLN
O40235/4-98         PLWDRPIVTAKVGGH............LCEVLLDTGADDTVLTNIQLEGK......WTPKMIGGIGGFI.KVKEYNNVTVEI.....EGREVKG.........TVLVGP..TPVN......ILGRNILTGLGCTLN
Q87622/71-165       PLWQRPMMEVLIQGQ............KCQALLDTGADDTVVEGIHLQGN......WKPKTIGGIGGFI.SVQQYNKVPIQI.....GDRTVLA.........TVLLGP..NPVN......IIGRNVLCLLGCTLN
Q87108/92-186       SLWRRPMKTVYIEGQ............KVTALLDTGADDSVIQGIELGDN......WKPRIIGGIGGCI.NVKAYHNQEVKI.....EDKTCKA.........TILVGE..TPVN......IIGRNVLAQLGVTLN
Q03261/81-182       SLWRRPMIEVDVEGD............LVQMLVDTGADDTIIREEDIQLHQP....WSPKIVGGLGGNI.TVRQYRNIRFTVVKPSGKRKQVEG.........TLLVGP..TPVN......ILGRNILTKLGVKLV
POL_SIVGB/65-161    SLSRRPIEEVSVDGV............TIRALLDTGADDTIFNERNIKLK..G..NWQPKIIGGIGGNL.RVKQYDNVYVEI.....RGKGTFG.........TVLIGP..TPID......IIGRNIMEKLGGKLI
O90273/84-180       TLSRRPIESILVNGQ............PVSALLDTGADDTIFSENSVRIEG....PYTPRVVGGIGGQI.RVKEYRDVFIEI.....AGKTTVG.........TVLLGP..TPVD......IVGRNILTAMGAKLI
POL_SIVAI/93-191    PLWRRPMKRVIIEGT............PVQALLDTGADDTIIQEKDLHFPPHK..PWRSKVVGGIGGGI.HVKEYQGVQVQL.....EDKIITG.........SILIGS..TPIN......IIGRNILAQAGMKLV
POL_SIVAG/97-193    PLWRRPIKTVYIEGV............PIRALLDTGADDTIIKEADLQLS..G..TWKPKIIGGIGGGL.NVKEYSDREVRL.....EDKILRG.........TILIGS..TPIN......IIGRNILAPAGAKLV
POL_SIVA1/92-188    PLWRRPIRTCIIGGT............AVKALLDTGADDTIIKDTDLQLRGS....WRPKIVGGIGGGL.NVKEYDNVEVQL.....EDKILRG.........TVLIGA..TPIN......IIGRNFLAQAGAKLV
P89904/124-220      PLWRRPMSKIYIQGQ............PVQVLLDTGADDTIIKEEDIHLEGR....WRPKVVGGIGGGI.SVKQYDNILVNI.....DGKETRG.........NVLIGP..TPIN......IVGRNILAPLGARLI
O11404/112-206      SLWRRPVVTAHIEGQ............PVEVLLDTGADDSIVTGIELGPH......YTPKIVGGIGGFI.NTKEYKNVEIEV.....LGKRIKG.........TIMTGD..TPIN......IFGRNLLTALGMSLN
GAG_AVIMA/6-122     EHKDRPLVRVILTNTGSHPVK..QRSVYITALLDSGADITIISEEDWPTDWPV.MEAANPQIHGIGGGIPMRKSRDMIEVGV.....INRDGSLER.......PLLLFPAVAMVRG....SILGRDCLQGLGLRLT
O89468/84-183       NLEKRPTTIVLINDT............PLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGIIGVGGNV.ETFSTPVTIKKK.....GRHIKTR..........MLVAD..IPVT......ILGRDILQDLGAKLV
POL_VILV/42-138     VTEAPPKIEIKVGTR............WKKLLVDTGADKTIVTSHDMSGI.....PKGRIILQGIGGII.EGEKWEQVHLQY.....KDKMIKG.........TIVVLAT.SPVE......VLGRDNMRELGIGLI
POL_OMVVS/23-119    VTEAPPKIDIKVGTN............WKKVLVDTGADRTIVRYHDNSGI.....PTGRIKLQGIGGII.EGEKWDKVVIQY.....KEKRIEG.........TIVVLPS.SPVE......VLGRDNMAKLDIGII
POL_CAEVC/47-143    ITSAPPMVQVRIGSQ............QRNLLFDTGADRTIVRWHEGSGN.....PAGRIKLQGIGGIV.EGEKWNNVELEY.....KGETRKG.........TIVVLPQ.SPVE......VLGRDNMARFGIKII
POL_FIVPE/47-153    TLEKRPEILIFVNGY............PIKFLLDTGADITILNRRDFQVKNSI..ENGRQNMIGVGGGK.RGTNYINVHLEI.....RDENYKTQC.......IFGNVCV.LEDNS.LIQPLLGRDNMIKFNIRLV
P90246/72-178       ELIHRPRILIYVNGI............PIRFLMDTGADITIMNAEDFNILNSI..PDGIQTMIGVGGGK.RGRKFRRVHLEI.....RDPNHRAQCL....FGNMCILDDNSLTE.....PLLGRDNMVRFGAKLV
Q82851/436-534      RLNRQPFIKIFLGGR............WVRALIDTGADEVVLKDIHWDRIKG....VPAASVVQVGVTG.RNIARRKSNVEW.....RFKNRYG.........IVDVLFSNTPVN......LLGRSVLQSIVTKFT
POL_BIV06/57-155    RLDKQPFIKVFIGGR............WVKGLVDTGADEVVLKNIHWDRIKG....YPGTPIKQIGVNG.VNVAKRKTHVEW.....RFKDKTG.........IIDVLFSDTPVN......LFGRSLLRSIVTCFT
VPRT_HTLV2/28-136   RQQQQPILGVRISVMGQTP.......QPTQALLDTGADLTVIPQTLVPGPVK....LHDTLILGASGQT.NTQFKLLQTPLH.....IFLPFRR.........SPVILSS.CLLDTHNKWTIIGRDALQQCQGLLY
O70641/448-556      EQQHQPLLDVQVSIAGAPP.......RPTQALLDTGADLTVLPQALAPESVS....VSDTTVLGAGGQT.SSQFKLLQSPLC.....VYLPFRR.........APVTLPS.CLVDTNSKWAIIGRDILQKCQSVLY
O12273/29-137       SQQKQPILHVQVSLSNTSP.......VDIQALLDTGADVTVLPAYLCPPD..S..NLQDTTVLGAGGPS.ANKFKILPHPVH.....IHLPFRR.........QPVTLTS.CLIDTNNQWAILGRDALQQCQSSLY
O56227/455-563      DPARRPVIKAQIDTQTSHP.......KTIEALLDTGADMTVLPIALFSSNTP....LKNTSVLGAGGQT.QDHFKLTSLPVL.....IRLPFRT.........TPIVLTS.CLVDTKNNWAIIGRDALQQCQGVLY
O09492/32-142       LARSRPSVAVYLSGPWLQPS.....QNQALMLVDTGAENTVLPQNWLVRDYP....RIPAAVLGAGGVS.RNRYNWLQGPLT.....LALKPEG.........PFITIPK.ILVDTFDKWQILGRDVLSRLQASIS
Q15408/32-128       ITEAELRVTLTVEGK............SIPCLIDTGATHSTLPSFQGPVS......LAPITVVGIDGQASKPLKTPPLWCQL.....GQHSFMH.........SFLVIPT.CPLP......LLGRNILTKLSASLT
POL_GALV/6-101      DPLPEPRVTLTVEGT............PIEFLVDTGAEHSVLTQPMGKVG......SRRTVVEGATGSK.VYPWTTKRLLKI.....GHKQVTH.........SFLVIPE.CPAP......LLGRDLLTKLKAQIQ
O89815/6-101        DPLPEPRVTLSVEGT............PVNFLIDTGAEHSVLTSPLGKLG......SKRTIVVGATGSK.LYPWTTKRALQI.....DKNMVTH.........SFLVIPE.CPAP......LLGRDLLTKLKAQVQ
POL_BAEVM/6-101     GAPPEPRLTLSVGGH............PTTFLVDTGAQHSVLTKANGPLS......SRTSWVQGATGRK.MHKWTNRRTVNL.....GQGMVTH.........SFLVVPE.CPYP......LLGRDLLTKLGAQIH
O39735/545-640      EPPPEPRITLKVGGQ............PVTFLVDTGAQNSVLTQNPGPLS......DKSAWVQGATGGK.RYRWTTDRRVHL.....ATGKVTH.........SFLHVPD.CPYP......LLGRDLLTKLKAQIH
O36449/6-102        SALREPRLKVKVGGQ............IIDFLVDTGATHSVVQKPVGPMS......KESVAIIGATGNIRNYPKSEGRLVDL.....GRGLVTH.........SFLVIPE.CPDP......LLGRDLLQKLRATIS
O36580/16-112       PSPSEPRVCLTIESQ............EVNCLLDTGAAFSVLLSCPRQLS......SRSVTIRGVLGQPVTTYFSQPLSCDW.....GTLLFSH.........AFLIMPE.SPTP......LLGRDILAKAGAIIH
POL4_DROME/30-146   VEEDRRVYTINYNLNIFSTFIHAKTGVKLVFLLDTGADISILKENSDKFSNIQ..ITNKINIQGIGQQKIQSRGQTFIEIQT.....GKYVIPHDF.......HLVDKNFPIPCDG.....IIGIDFIKKYNCQID
POL3_DROME/9-107    SLGKPQYITIKYKEN............NLKCLIDTGSTVNMTSKNIFDLPIQ....NTSTFIHTSNGPL.IVNKSIIIPSKI.....LFPTTNE..........FLLHPFSENYD.....LLLGRKLLAEAKATIS
POL2_DROME/9-107    SSGKYEYIKIVYKGR............SYKCLLDTGSTINMINENIFCLPIQ....NSRCEVLTSNGPI.TLNDLIMLPRNS.....IFKKTEP..........FYVHRFSNNYD.....MLIGRKLLKNAQSVIN
O44384/436-533      GRSRLPFIERRLAGR............TLKMLIDTDAAKNYIRPVKEL........KNVMPVASPFSVS.SIHGSTEIKHKC.....LMKVFKHIS.......PFFLLDSLNAFD.....AIIGLDLLTQAGVKLN
POL_COYMV/1192-1305 KAEYNGLYNVKVGIKPDNME.....PYYINAIVDTGATACLIQISAIPENYYE.DAKVTVNFRSVLGIGTSTQMIKAGRILI.....GEQYFRMPV.......TYVMNMGLSPGI....QMIIGCSFIRSLEGGLR
O90301/968-1079     GCYVETKISFNNENR............IITALIDSGSTHNIICPTLIPASWIN.STHREIIMFAVDNSKYNLNQELIDDIKL.....QFQEVDETFGIKYKLGQTYVAP..KPTKT....FIIGHRFLTNENGSVT
POLX_TOBAC/276-378  LFINEEEECMHLSGP............ESEWVVDTAASHHATPVRDLFCRYVA.GDFGTVKMGNTSYSKIAGIGDICIKTNV.....GCTLVLK.........DVRHVPD.LRMN.....LISGIALDRDGYESYF