Bioinformatics and Computational Molecular Biology Hardware

BLOSUM 45

 


Gly(G)   7
Pro(P)  -2   9
Asp(D)  -1  -1   7
Glu(E)  -2   0   2   6 
Asn(N)   0  -2   2   0   6
His(H)  -2  -2   0   0   1  10
Gln(Q)  -2  -1   0   2   0   1   6
Lys(K)  -2  -1   0   1   0  -1   1   5
Arg(R)  -2  -2  -1   0   0   0   1   3   7
Ser(S)   0  -1   0   0   1  -1   0  -1  -1   4
Thr(T)  -2  -1  -1  -1   0  -2  -1  -1  -1   2   5
Ala(A)   0  -1  -2  -1  -1  -2  -1  -1  -2   1   0   5
Met(M)  -2  -2  -3  -2  -2   0   0  -1  -1  -2  -1  -1   6
Val(V)  -3  -3  -3  -3  -3  -3  -3  -2  -2  -1   0   0   1   5
Ile(I)  -4  -2  -4  -3  -2  -3  -2  -3  -3  -2  -1  -1   2   3   5
Leu(L)  -3  -3  -3  -2  -3  -2  -2  -3  -2  -3  -1  -1   2   1   2   5
Phe(F)  -3  -3  -4  -3  -2  -2  -4  -3  -2  -2  -1  -2   0   0   0   1   8
Tyr(Y)  -3  -3  -2  -2  -2   2  -1  -1  -1  -2  -1  -2   0  -1   0   0   3   8
Trp(W)  -2  -3  -4  -3  -4  -3  -2  -2  -2  -4  -3  -2  -2  -3  -2  -2   1   3  15
Cys(C)  -3  -4  -3  -3  -2  -3  -3  -3  -3  -1  -1  -1  -2  -1  -3  -2  -2  -3  -5  12
        Gly Pro Asp Glu Asn His Gln Lys Arg Ser Thr Ala Met Val Ile Leu Phe Tyr Trp Cys
        (G) (P) (D) (E) (N) (H) (Q) (K) (R) (S) (T) (A) (M) (V) (I) (L) (F) (Y) (W) (C)  

Substitution matrices are symmetric, so the upper-right portion of the matrix (not shown) mirrors the lower-left.

Maximum value = 15 (W-W), minimum value = -5 (C-W)

 

Boise State University College of Engineering

Boise State University Department of Electrical and Computer Engineering

This page created by Dr. Scott F. Smith

This page was last updated on 03 February 2004.