Bioinformatics and Computational Molecular Biology Hardware
BLOSUM 62
Ala(A) 4
Arg(R) -1 5
Asn(N) -2 0 6
Asp(D) -2 -2 1 6
Cys(C) 0 -3 -3 -3 9
Gln(Q) -1 1 0 0 -3 5
Glu(E) -1 0 0 2 -4 2 5
Gly(G) 0 -2 0 -1 -3 -2 -2 6
His(H) -2 0 1 -1 -3 0 0 -2 8
Ile(I) -1 -3 -3 -3 -1 -3 -3 -4 -3 4
Leu(L) -1 -2 -3 -4 -1 -2 -3 -4 -3 2 4
Lys(K) -1 2 0 -1 -3 1 1 -2 -1 -3 -2 5
Met(M) -1 -1 -2 -3 -1 0 -2 -3 -2 1 2 -1 5
Phe(F) -2 -3 -3 -3 -2 -3 -3 -3 -1 0 0 -3 0 6
Pro(P) -1 -2 -2 -1 -3 -1 -1 -2 -2 -3 -3 -1 -2 -4 7
Ser(S) 1 -1 1 0 -1 0 0 0 -1 -2 -2 0 -1 -2 -1 4
Thr(T) 0 -1 0 -1 -1 -1 -1 -2 -2 -1 -1 -1 -1 -2 -1 1 5
Trp(W) -3 -3 -4 -4 -2 -2 -3 -2 -2 -3 -2 -3 -1 1 -4 -3 -2 11
Tyr(Y) -2 -2 -2 -3 -2 -1 -2 -3 2 -1 -1 -2 -1 3 -3 -2 -2 2 7
Val(V) 0 -3 -3 -3 -1 -2 -2 -3 -3 3 1 -2 1 -1 -2 -2 0 -3 -1 4
Ala Arg Asn Asp Cys Gln Glu Gly His Ile Leu Lys Met Phe Pro Ser Thr Trp Tyr Val
(A) (R) (N) (D) (C) (Q) (E) (G) (H) (I) (L) (K) (M) (F) (P) (S) (T) (W) (Y) (V)
Substitution matrices are symmetric, so the upper-right portion of the matrix (not shown) mirrors the lower-left.
Maximum value = 11 (W-W), minimum value = -4 (many)
Boise State University College of Engineering
Boise State University Department of Electrical and Computer Engineering
This page created by Dr. Scott F. Smith
This page was last updated on 03 February 2004.